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The stereotactic normalization result is shown on the NORMALIZED page. Please verify that the normalization procedure was successful by evaluating the alignment in different parts of the brain. Particularly helpful are the iso-contour lines. The thresholds on the TEMPLATE and the NORMALIZED panel should be adjusted so that the lines follow the same structures. The final brain structure outlines will only be adequate if if the normalization succeeded.
To start the mapping of the atlas brain structures to the patient space please activate the Segment Brain action button.